NovAST Documentation

Contents

• Introduction to NovAST
  • Installation
  • Quickstart
  • Tutorials
• Tutorial 1: MERFISH mouse Primary Motor (MOp) Cortex
  • 1. Import NovAST Functions
  • 2. Data Preparation
  • 3. Required Arguments
  • 4. Run NovAST
  • 5. Visualize the output
• Tutorial 2: Xenium Human Lung
  • 1. Import NovAST Functions
  • 2. Data Preparation
  • 3. Required Arguments
  • 4. Run NovAST
  • 5. Visualize the output
• Tutorial 3: MERFISH Human Developmental Cortex
  • 1. Import NovAST Functions
  • 2. Data Preparation
  • 3. Required Arguments
  • 4. Run NovAST
  • 5. Visualize the output
• Tutorial 4: Xenium IPF Lung
  • 1. Import NovAST Functions
  • 2. Data Preparation
  • 3. Required Arguments
  • 4. Run NovAST
  • 5. Visualize the output
• Tutorial 5: MERFISH Mouse Inflamed Colons
  • 1. Import NovAST Functions
  • 2. Data Preparation
  • 3. Required Arguments
  • 4. Run NovAST
  • 5. Visualize the output